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A BGC-Argo Guide: Planning, Deployment, Data Handling and Usage ArchiMer
Bittig, Henry C.; Maurer, Tanya L.; Plant, Joshua N.; Schmechtig, Catherine; Wong, Annie P. S.; Claustre, Hervé; Trull, Thomas W.; Udaya Bhaskar, T. V. S.; Boss, Emmanuel; Dall’olmo, Giorgio; Organelli, Emanuele; Poteau, Antoine; Johnson, Kenneth S.; Hanstein, Craig; Leymarie, Edouard; Le Reste, Serge; Riser, Stephen C.; Rupan, A. Rick; Taillandier, Vincent; Thierry, Virginie; Xing, Xiaogang.
The Biogeochemical-Argo program (BGC-Argo) is a new profiling-float-based, ocean wide, and distributed ocean monitoring program which is tightly linked to, and has benefited significantly from, the Argo program. The community has recommended for BGC-Argo to measure six additional properties in addition to pressure, temperature and salinity measured by Argo, to include oxygen, pH, nitrate, downwelling light, chlorophyll fluorescence and the optical backscattering coefficient. The purpose of this addition is to enable the monitoring of ocean biogeochemistry and health, and in particular, monitor major processes such as ocean deoxygenation, acidification and warming and their effect on phytoplankton, the main source of energy of marine ecosystems. Here we...
Tipo: Text Palavras-chave: Ocean observation; Ocean biogeochemical cycles; Sensors; Carbon cycle; Ocean optics; Best practices; Argo.
Ano: 2019 URL: https://archimer.ifremer.fr/doc/00512/62344/66607.pdf
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Abrupt warming and salinification of intermediate waters interplays with decline of deep convection in the Northwestern Mediterranean Sea ArchiMer
Margirier, Félix; Testor, Pierre; Heslop, Emma; Mallil, Katia; Bosse, Anthony; Houpert, Loïc; Mortier, Laurent; Bouin, Marie-noëlle; Coppola, Laurent; D’ortenzio, Fabrizio; Durrieu De Madron, Xavier; Mourre, Baptiste; Prieur, Louis; Raimbault, Patrick; Taillandier, Vincent.
The Mediterranean Sea is a hotspot for climate change, and recent studies have reported its intense warming and salinification. In this study, we use an outstanding dataset relying mostly on glider endurance lines but also on other platforms to track these trends in the northwestern Mediterranean where deep convection occurs. Thanks to a high spatial coverage and a high temporal resolution over the period 2007–2017, we observed the warming (+0.06 ∘C year−1) and salinification (+0.012 year−1) of Levantine Intermediate Water (LIW) in the Ligurian Sea. These rates are similar to those reported closer to its formation area in the Eastern Mediterranean Sea. Further downstream, in the Gulf of Lion, the intermediate heat and salt content were exported to the deep...
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Ano: 2020 URL: https://archimer.ifremer.fr/doc/00663/77507/79256.pdf
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Biogeochemical Argo: The Test Case of the NAOS Mediterranean Array ArchiMer
D’ortenzio, Fabrizio; Taillandier, Vincent; Claustre, Hervé; Prieur, Louis Marie; Leymarie, Edouard; Mignot, Alexandre; Poteau, Antoine; Penkerc’h, Christophe; Schmechtig, Catherine Marie.
The necessity of wide, global-scale observing systems for marine biogeochemistry emerged dramatically in the last decade. A global network based on Biogeochemical (BGC) Argo floats is considered to be one of the most promising approaches for reaching this goal. As a first step, pilot studies were encouraged to test the feasibility of a global BGC-Argo array, to consolidate the methods and practices under development, and to set up the array’s characteristics. A pilot study in The Mediterranean Sea—deemed a suitable candidate for a test case because it combines a relatively large diversity of oceanic BGC conditions in a reduced open-ocean basin—was consequently approved as a part of the “Novel Argo ocean Observing System” (NAOS) project, a French national...
Tipo: Text Palavras-chave: BGC-Argo floats; Mediterranean; Bioregions; Ocean color; Physical biological interactions.
Ano: 2020 URL: https://archimer.ifremer.fr/doc/00618/73031/72145.pdf
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Carbonate system properties and anthropogenic carbon inventory in the Algerian Basin during SOMBA cruise (2014): Acidification estimate ArchiMer
Keraghel, Mehdia Asma; Louanchi, Ferial; Zerrouki, Mohamed; Kaci, Malik Ait; Aït-ameur, Nadira; Labaste, Matthieu; Legoff, Hervé; Taillandier, Vincent; Harid, Romaissa; Mortier, Laurent.
Recent studies have provided a better understanding of carbonate system parameters and their spatial and temporal variability in several areas of the Mediterranean Sea. This study uses a new dataset that covered the entire Algerian Basin during the summer of 2014 (SOMBA cruise) to describe the distribution of carbonate system parameters. The findings show that almost the entire basin was a source of CO2 to the atmosphere during the studied period. Besides the well-known TrOCA (Tracer combining Oxygen, Carbon and total Alkalinity) approach, the study proposes new parametrization for the standard back calculation method to assess the anthropogenic carbon concentration. The results of both approaches yield similar distributions and concentration ranges...
Tipo: Text Palavras-chave: Algerian Basin; Carbonate system; Anthropogenic carbon inventory; Acidification; Mesoscale activity.
Ano: 2020 URL: https://archimer.ifremer.fr/doc/00615/72729/71829.pdf
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Community-Level Responses to Iron Availability in Open Ocean Planktonic Ecosystems ArchiMer
Caputi, Luigi; Carradec, Quentin; Eveillard, Damien; Kirilovsky, Amos; Pelletier, Eric; Karlusich, Juan J. Pierella; Vieira, Fabio Rocha Jimenez; Villar, Emilie; Chaffron, Samuel; Malviya, Shruti; Scalco, Eleonora; Acinas, Silvia G.; Alberti, Adriana; Aury, Jean-marc; Benoiston, Anne-sophie; Bertrand, Arnaud; Biard, Tristan; Bittner, Lucie; Boccara, Martine; Brum, Jennifer R.; Brunet, Cedric; Busseni, Greta; Carratala, Anna; Claustre, Herve; Coelho, Luis Pedro; Colin, Sbastien; D'Aniello, Salvatore; Da Silva, Corinne; Del Core, Marianna; Dore, Hugo; Gasparini, Stephane; Kokoszka, Florian; Jamet, Jean-louis; Lejeusne, Christophe; Lepoivre, Cyrille; Lescot, Magali; Lima-mendez, Gipsi; Lombard, Fabien; Lukes, Julius; Maillet, Nicolas; Madoui, Mohammed-amin; Martinez, Elodie; Mazzocchi, Maria Grazia; Neou, Mario B.; Paz-yepes, Javier; Poulain, Julie; Ramondenc, Simon; Romagnan, Jean-baptiste; Roux, Simon; Manta, Daniela Salvagio; Sanges, Remo; Speich, Sabrina; Sprovieri, Mario; Sunagawa, Shinichi; Taillandier, Vincent; Tanaka, Atsuko; Tirichine, Leila; Trottier, Camille; Uitz, Julia; Veluchamy, Alaguraj; Vesela, Jana; Vincent, Flora; Yau, Sheree; Kandels-lewis, Stefanie; Searson, Sarah; Dimier, Cline; Picheral, Marc; Bork, Peer; Boss, Emmanuel; De Vargas, Colomban; Follows, Michael J.; Grimsley, Nigel; Guidi, Lionel; Hingamp, Pascal; Karsenti, Eric; Sordino, Paolo; Stemmann, Lars; Sullivan, Matthew B.; Tagliabue, Alessandro; Zingone, Adriana; Garczarek, Laurence; D'Ortenzio, Fabrizio; Testor, Pierre; Not, Fabrice; D'Alcala, Maurizio Ribera; Wincker, Patrick; Bowler, Chris; Iudicone, Daniele; Gorsky, Gabriel; Jaillon, Olivier; Karp-boss, Lee; Krzic, Uros; Ogata, Hiroyuki; Pesant, Stephane; Raes, Jeroen; Reynaud, Emmanuel G.; Sardet, Christian; Sieracki, Mike; Velayoudon, Didier; Weissenbach, Jean.
Predicting responses of plankton to variations in essential nutrients is hampered by limited in situ measurements, a poor understanding of community composition, and the lack of reference gene catalogs for key taxa. Iron is a key driver of plankton dynamics and, therefore, of global biogeochemical cycles and climate. To assess the impact of iron availability on plankton communities we explored the comprehensive bio‐oceanographic and ‐omics datasets from Tara Oceans in the context of the iron products from two state‐of‐the‐art global scale biogeochemical models. We obtained novel information about adaptation and acclimation towards iron in a range of phytoplankton, including picocyanobacteria and diatoms, and identified whole sub‐communities co‐varying with...
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Ano: 2019 URL: https://archimer.ifremer.fr/doc/00475/58680/61184.pdf
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Deep maxima of phytoplankton biomass, primary production and bacterial production in the Mediterranean Sea ArchiMer
Maranon, Emilio; Van Vambeke, France; Uitz, Julia; Boss, Emmanuel S; Dimier, Céline; Dinasquet, Julie; Engel, Anja; Haentjens, Nils; Perez-lorenzo, Maria; Taillandier, Vincent; Zancker, Birthe.
The deep chlorophyll maximum (DCM) is a ubiquitous feature of phytoplankton vertical distribution in stratified waters that is relevant to our understanding of the mechanisms that underpin the variability in photoautotroph ecophysiology across environmental gradients and has implications for remote sensing of aquatic productivity. During the PEACETIME (Process studies at the air-sea interface after dust deposition in the Mediterranean Sea) cruise, carried out from 10 May to 11 June 2017, we obtained 23 concurrent vertical profiles of phytoplankton chlorophyll a, carbon biomass and primary production, as well as heterotrophic prokaryotic production, in the western and central Mediterranean basins. Our main aims were to quantify the relative role of...
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Ano: 2021 URL: https://archimer.ifremer.fr/doc/00642/75454/76271.pdf
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Estimating dense water volume and its evolution for the year 2012-2013 in the Northwestern Mediterranean Sea: An observing system simulation experiment approach ArchiMer
Waldman, Robin; Somot, Samuel; Herrmann, Marine; Testor, Pierre; Estournel, Claude; Sevault, Florence; Prieur, Louis; Mortier, Laurent; Coppola, Laurent; Taillandier, Vincent; Conan, Pascal; Dausse, Denis.
The Northwestern Mediterranean (NWMed) Sea includes one of the best observed ocean deep convection sites in the World. An observing system simulation experiment (OSSE) is developed to provide a methodology for estimating observing network errors. It is applied to quantify dense water volumes in the NWMed during 2012–2013 with their observation error from MOOSE network. Results from the OSSE show low spatiotemporal sampling errors, which confirms MOOSE network ability to measure dense waters. However, results are highly sensitive to instrumental stability. The dense water volume is then estimated in observations from four ship cruises between summers 2012 and 2013. A large seasonal cycle is found, maximal in spring 2013 and dominated by the area west of...
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Ano: 2016 URL: http://archimer.ifremer.fr/doc/00350/46080/46025.pdf
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Hydrography and biogeochemistry dedicated to the Mediterranean BGC-Argo network during a cruise with RV Tethys 2 in May 2015 ArchiMer
Taillandier, Vincent; Wagener, Thibaut; D'Ortenzio, Fabrizio; Mayot, Nicolas; Legoff, Herve; Ras, Josephine; Coppola, Laurent; Pasqueron De Fommervault, Orens; Schmechtig, Catherine; Diamond, Emilie; Bittig, Henry; Lefevre, Dominique; Leymarie, Edouard; Poteau, Antoine; Prieur, Louis.
We report on data from an oceanographic cruise, covering western, central and eastern parts of the Mediterranean Sea, on the French research vessel Tethys 2 in May 2015. This cruise was fully dedicated to the maintenance and the metrological verification of a biogeochemical observing system based on a fleet of BGC-Argo floats. During the cruise, a comprehensive data set of parameters sensed by the autonomous network was collected. The measurements include ocean currents, seawater salinity and temperature, and concentrations of inorganic nutrients, dissolved oxygen and chlorophyll pigments. The analytical protocols and data processing methods are detailed, together with a first assessment of the calibration state for all the sensors deployed during the...
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Ano: 2018 URL: https://archimer.ifremer.fr/doc/00677/78943/81333.pdf
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Influence of atmospheric deposition on biogeochemical cycles in an oligotrophic ocean system ArchiMer
Van Wambeke, France; Taillandier, Vincent; Deboeufs, Karine; Pullido-villena, Elvira; Dinasquet, Julie; Engel, Anja; Maranon, Emilio; Ridame, Céline; Guieu, Cécile.
The surface mixed layer (ML) in the Mediterranean Sea is a well stratified domain characterized by low macro-nutrient and low chlorophyll content, during almost 6 months of the year. Nutrient dynamics in the ML depend on allochthonous inputs, through atmospheric deposition and on biological recycling. Here we characterize the biogeochemical cycling of N in the ML by combining simultaneous in situ measurements of atmospheric deposition, nutrients, hydrological conditions, primary production, heterotrophic prokaryotic production, N2 fixation and leucine aminopeptidase activity. The measurements were conducted along a 4300 km transect across the central and western open Mediterranean Sea in spring 2017. Dry deposition was measured on a continuous basis while...
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Ano: 2020 URL: https://archimer.ifremer.fr/doc/00659/77153/78527.pdf
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Multiscale Observations of Deep Convection in the Northwestern Mediterranean Sea During Winter 2012-2013 Using Multiple Platforms ArchiMer
Testor, Pierre; Bosse, Anthony; Houpert, Loic; Margirier, Felix; Mortier, Laurent; Legoff, Herve; Dausse, Denis; Labaste, Matthieu; Karstensen, Johannes; Hayes, Daniel; Olita, Antonio; Ribotti, Alberto; Schroeder, Katrin; Chiggiato, Jacopo; Onken, Reiner; Heslop, Emma; Mourre, Baptiste; D'Ortenzio, Fabrizio; Mayot, Nicolas; Lavigne, Heloise; De Fommervault, Orens; Coppola, Laurent; Prieur, Louis; Taillandier, Vincent; De Madron, Xavier Durrieu; Bourrin, Francois; Many, Gael; Damien, Pierre; Estournel, Claude; Marsaleix, Patrick; Taupier-letage, Isabelle; Raimbault, Patrick; Waldman, Robin; Bouin, Marie-noelle; Giordani, Herve; Caniaux, Guy; Somot, Samuel; Ducrocq, Veronique; Conan, Pascal.
During winter 2012-2013, open-ocean deep convection which is a major driver for the thermohaline circulation and ventilation of the ocean, occurred in the Gulf of Lions (Northwestern Mediterranean Sea) and has been thoroughly documented thanks in particular to the deployment of several gliders, Argo profiling floats, several dedicated ship cruises, and a mooring array during a period of about a year. Thanks to these intense observational efforts, we show that deep convection reached the bottom in winter early in February 2013 in a area of maximum 28±3 109m9. We present new quantitative results with estimates of heat and salt content at the sub-basin scale at different time scales (on the seasonal scale to a ten days basis) through optimal interpolation...
Tipo: Text Palavras-chave: Ocean observation; Oceanic deep convection; Mediterranean Sea; Energy and buoyancy fluxes; Eddies; Plumes; Symmetric instability.
Ano: 2018 URL: https://archimer.ifremer.fr/doc/00415/52639/53494.pdf
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Preparing the New Phase of Argo: Scientific Achievements of the NAOS Project ArchiMer
Le Traon, Pierre-yves; D'Ortenzio, Fabrizio; Babin, Marcel; Leymarie, Edouard; Marec, Claudie; Pouliquen, Sylvie; Thierry, Virginie; Cabanes, Cecile; Claustre, Hervé; Desbruyeres, Damien; Lacour, Leo; Lagunas, Jose-luis; Maze, Guillaume; Mercier, Herle; Penkerc'H, Christophe; Poffa, Noe; Poteau, Antoine; Prieur, Louis; Racape, Virginie; Randelhoff, Achim; Rehm, Eric; Schmechtig, Catherine Marie; Taillandier, Vincent; Wagener, Thibaut; Xing, Xiaogang.
Argo, the international array of profiling floats, is a major component of the global ocean and climate observing system. In 2010, the NAOS (Novel Argo Observing System) project was selected as part of the French “Investissements d’Avenir” Equipex program. The objectives of NAOS were to consolidate the French contribution to Argo’s core mission (global temperature and salinity measurements down to 2000 m), and also to develop the future generation of French Argo profiling floats and prepare the next phase of the Argo program with an extension to the deep ocean (Deep Argo), biogeochemistry (BGC-Argo) and polar seas. This paper summarizes how NAOS has met its objectives. The project significantly boosted France’s contribution to Argo’s core mission by...
Tipo: Text Palavras-chave: Profiling floats; Deep ocean; Biogeochemistry; Mediterranean Sea; Arctic; Atlantic; Argo.
Ano: 2020 URL: https://archimer.ifremer.fr/doc/00654/76584/77729.pdf
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Preparing the New Phase of Argo: Technological Developments on Profiling Floats in the NAOS Project ArchiMer
André, Xavier; Le Traon, Pierre-yves; Le Reste, Serge; Dutreuil, Vincent; Leymarie, Edouard; Malardé, Damien; Marec, Claudie; Sagot, Jérôme; Amice, Martin; Babin, Marcel; Claustre, Hervé; David, Arnaud; D’ortenzio, Fabrizio; Kolodziejczyk, Nicolas; Lagunas, José Luis; Le Menn, Marc; Moreau, Bertrand; Nogré, David; Penkerc’h, Christophe; Poteau, Antoine; Renaut, Corentin; Schaeffer, Christophe; Taillandier, Vincent; Thierry, Virginie.
The international array of profiling floats known as Argo is a major component of the global ocean- and climate-observing system. In 2010, the NAOS (Novel Argo Observing System) project was selected as part of France’s Equipex “Investissement d’Avenir” program. The objectives of NAOS were to consolidate the French contribution to the Argo core mission (global temperature and salinity measurements down to 2,000 m) as well as to develop the future generation of French Argo profiling floats and prepare the next phase of the Argo program with an extension to the deep ocean (Deep-Argo), biogeochemistry (BGC-Argo) and polar seas. This paper summarizes the main technological advances and at-sea validations carried out as part of NAOS: development of a deep (4,000...
Tipo: Text Palavras-chave: Ocean; Argo; Global observing system; Profiling float; Deep; Biogeochemistry; Under-ice; Float technology.
Ano: 2020 URL: https://archimer.ifremer.fr/doc/00658/77029/78314.pdf
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Process studies at the air-sea interface after atmospheric deposition in the Mediterranean Sea: objectives and strategy of the PEACETIME oceanographic campaign (May–June 2017) ArchiMer
Guieu, Cécile; D'Ortenzio, Fabrizio; Dulac, François; Taillandier, Vincent; Doglioli, Andrea; Petrenko, Anne; Barrillon, Stéphanie; Mallet, Marc; Nabat, Pierre; Desboeufs, Karine.
In spring, the Mediterranean Sea, a well-stratified low nutrient low chlorophyll region, receives atmospheric deposition both desert dust from the Sahara and airborne particles from anthropogenic sources. Such deposition translates into a supply of new nutrients and trace metals for the surface waters that likely impact biogeochemical cycles. However, the quantification of the impacts and the processes involved are still far from being assessed in situ. In this paper, we provide a state of the art regarding dust deposition and its impact on the Mediterranean Sea biogeochemistry and we describe in this context the objectives and strategy of the PEACETIME project and cruise, entirely dedicated to filling this knowledge gap. Our strategy to go a step forward...
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Ano: 2020 URL: https://archimer.ifremer.fr/doc/00611/72340/71224.pdf
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Profiling float observation of thermohaline staircases in the western Mediterranean Sea and impact on nutrient fluxes ArchiMer
Taillandier, Vincent; Prieur, Louis; D'Ortenzio, Fabrizio; Ribera D'Alcala, Maurizio; Pulido-villena, Elvira.
Characterizing the spatio-temporal arrangements of inorganic nutrients is critical to improve our understanding of the marine biological primary production. Among the processes contributing to nutrient distributions, diapycnal diffusion plays a crucial role for the supply of nutrients to the surface productive zone, and for the equilibration of vertical differences in nutrient concentrations induced by large scale thermohaline circulation. This is the case in the western Mediterranean Sea, where Levantine intermediate waters (LIW), that circulate below the surface layer, regionally distribute the nutrient stocks conveyed from the eastern basin or provided by terrestrial inputs, atmospheric deposition, and remineralization of organic matter. In the present...
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Ano: 2020 URL: https://archimer.ifremer.fr/doc/00603/71558/69978.pdf
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Sensitive Determination of the Dissolved Phosphate Pool for an Improved Resolution of Its Vertical Variability in the Surface Layer: New Views in the P-Depleted Mediterranean Sea ArchiMer
Djaoudi, Kahina; Van Wambeke, France; Coppola, Laurent; D'Ortenzio, Fabrizio; Helias-nunige, Sandra; Raimbault, Patrick; Taillandier, Vincent; Testor, Pierre; Wagener, Thibaut; Pulido-villena, Elvira.
An accurate understanding of the biogeochemistry of dissolved phosphate pool in the upper waters of P-depleted oceanic regions is constrained by the low sensitivity of routine phosphate measurements. In this study, by using the sensitive Liquid Waveguide Capillary Cell method, we report the first extensive cross-basin survey of nanomolar dissolved inorganic phosphate (DIP) and dissolved organic phosphate (DOP) concentration in P-depleted surface waters of the Mediterranean Sea during the stratification period. In the north western Mediterranean Sea (NWMS), DIP above the mixed layer depth (MLD) ranged between 4.9 and 26.5 nM. Along an E-W transect crossing Ionian and Tyrrhenian Seas (E-W transect), DIP above the MLD was lower, ranging between 0.9 and 11.4...
Tipo: Text Palavras-chave: The Mediterranean Sea; Dissolved inorganic phosphate; Dissolved organic phosphate; N:P ratios; Liquid waveguide capillary cell.
Ano: 2018 URL: https://archimer.ifremer.fr/doc/00450/56184/57731.pdf
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Spatial patterns of ectoenzymatic kinetics in relation to biogeochemical properties in the Mediterranean Sea and the concentration of the fluorogenic substrate used ArchiMer
Van Wambeke, France; Pulido, Elvira; Catala, Philippe; Dinasquet, Julie; Djaoudi, Kahina; Engel, Anja; Garel, Marc; Guasco, Sophie; Barbara, Marie; Nunige, Sandra; Taillandier, Vincent; Zancker, Birthe; Tamburini, Christian.
Ectoenzymatic activity, prokaryotic heterotrophic abundances and production were determined in the Mediterranean Sea. Sampling was carried out in the sub-surface, the deep chlorophyll maximum layer (DCM), the core of the Levantine intermediate waters and in the deeper part of the mesopelagic layers. Michaelis–Menten kinetics were assessed using a large range of concentrations of fluorogenic substrates (0.025 to 50 µM). As a consequence, Km (Michaelis–Menten half-saturation constant) and Vm (maximum hydrolysis velocity) parameters were determined for both low- and high-affinity enzymes for alkaline phosphatase, aminopeptidase (LAP) and β-glucosidase (βGLU). Based on the constant derived from the high-LAP-affinity enzyme (0.025–1 µM substrate concentration...
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Ano: 2021 URL: https://archimer.ifremer.fr/doc/00642/75452/76268.pdf
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